National Center for Macromolecular Imaging
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National Center for Macromolecular Imaging
Workshop on Single Particle Reconstructions and Visualization (& EMAN Tutorial)

Agenda







































































































































































































































































































































Date Time Speaker Topic Location
12/11/02 8:00am

Registration href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/11/02 8:45am Wah Chiu

L. Johnsson		 Welcome href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/11/02 9:00am Tony Crowther Image Processing Basics
(FFT, Convolution, Filtration)		 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/11/02 10:00am

Coffee Break href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/11/02 10:15am Tony Crowther Image Processing Basics
(FFT, Convolution, Filtration)		 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/11/02 11:15am Steve Ludtke Introduction to EMAN href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/11/02 12:15pm

Lunch on your own

12/11/02 1:30pm Steve Ludtke Hands-on Workshop

EMAN Installation

A Quick Reconstruction

EMAN GUI

First stages of a Real Reconstruction		 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 200
12/11/02 6:30pm

BBQ Dinner href="http://www.uh.edu/campus_map/buildings/AAF.html">Alumni
Facility
12/11/02 7:30pm M. F. Schmid Participant presentations href="http://www.uh.edu/campus_map/buildings/AAF.html">Alumni
Facility




12/12/02 9:00am Wah Chiu Image Contrast Theory href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/12/02 10:00am

Coffee Break href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/12/02 10:10am Pawel Penczek 3D Reconstruction Algorithms

Resolution Measures

 href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/12/02 11:40am Steve Ludtke CTF Parameterization and
Correction

 href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/12/02 12:15pm

Lunch on your own

12/12/02 1:30pm Steve Ludtke Hands-on Workshop

CTF Parameter Determination

Model Refinement

Python Scripting

Database

 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 200
12/12/02 6:00pm

Buffet Dinner href="http://www.uh.edu/campus_map/buildings/AAF.html">Alumni
Facility
12/12/02 7:30pm B. V. V. Prasad Participant presentations href="http://www.uh.edu/campus_map/buildings/AAF.html">Alumni
Facility




12/13/02 9:00am Pawel Penczek 2D Alignment and Measures
of Similarity		 href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/12/02 10:00am

Coffee Break href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/13/02 10:10am Matt Baker,
Wen Jiang		 Helixhunter and Foldhunter href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/13/02 11:10am Steve Ludtke Difficult Reconstruction
Cases

EMEN

 href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/13/02 12:10pm

Lunch on your own

12/13/02 1:30pm Steve Ludtke Hands-on Workshop

Model Evaluation

Difficult Cases

 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 200
12/13/02 7:00pm

Christmas Dinner href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College




12/14/02 9:00am Chandrajit Bajaj

 Scientific Visualization

 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/12/02 10:00am

Coffee Break href="http://www.uh.edu/campus_map/buildings/CHC.html">Hilton
College
12/14/02 10:10am Matthew Dougherty Scientific Animation href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/14/02 12:00pm

Box Lunch href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/14/02 1:30pm Matthew Dougherty

Matt Baker

Wen Jiang		 Hands-on workshop

SAIL, IRIS Explorer and Other Tools		 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 200




12/15/02 8:00am

Continental breakfast href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/15/02 9:00am Steve Ludtke

Pawel Penczek

Matt Baker

Matthew Dougherty

Wen Jiang		 Hands-on workshop Q&A:
BYOD (bring your own data)

Participants can work on their own data or example data from the
workshop to get questions answered and issues resolved.		 href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232
12/15/02 1:00pm

Workshop ends href="http://www.uh.edu/campus_map/buildings/PGH.html">Hoffman
Hall, Rm 232