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Workshop on Single Particle Reconstruction and Visualization
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| Agenda |
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March 14, 2007 – Wednesday
Day 1
Bus leaves hotel promptly at 8:00am (if you know someone with a rental car, consider getting a ride)
Registration & Breakfast 8:00 - 9:00
Lecture
8:50 - 9:00 Welcome to the TLC^2 - Don Birx (VP of Research)
9:00 - 9:45 Welcome, and overview of single particle processing - Steve Ludtke
9:45 - 10:30 Fourier Transforms and Filtration - Mike Marsh
10:30 - 10:45 Coffee Break
10:45 - 11:45 Image Processing Basics and Image Contrast Theory - Wah Chiu
11:45 – 12:45 Lunch
Hands-on
12:45 – 2:30 EMAN Tutorial
2:30 – 2:45 Break
2:45 – 5:30 EMAN Tutorial
6:00 p.m. Dinner - UH Alumni Center
with 10 minute Participant Presentations
9:00 pm Shuttle leaves for Hotel
March 15, 2007 – Thursday
Day 2
8:00 Bus leaves hotel
8:00 - 9:00 Breakfast
Lecture
9:00 - 9:45 Visualization in Chimera - Tom Ferrin
9:45 - 10:30 CTF, Resolution Assessment - Steve Ludtke
10:30 - 10:45 Break
10:45 - 11:45 Image alignment, measures of similarity, 3D Reconstruction - Pawel Penczek
11:45 - 12:45 Lunch
Hands-on
12:45 – 2:30 EMAN Tutorial
2:30 – 2:45 Break
2:45 - 4:00 EMAN Tutorial
4:00 - 5:00 Chimera Tutorial - Tom Goddard
5:30 Bus leaves to NCMI
6:00 pm Dinner @ NCMI (Baylor College of Medicine, Alkek Building 3rd Floor),
BCM & NCMI Tour
9:00 pm Bus leaves for hotel
March 16, 2007 – Friday
Day 3
8:00 Bus leaves hotel
8:00 - 9:00 Breakfast
Lecture
9:00 - 9:45 Data Deposition at the EBI - Kim Henrick
9:45 - 10:30 AIRS, model interpretation and building - Matt Baker
10:30 – 10:45 Coffee Break
10:45 - 11:45 Icosahedral Reconstructions - Wen Jiang
11:45 - 12:45 Lunch
Hands-on
12:45 - 1:45 AIRS tutorial - Matt Baker
1:45 - 2:45 Using Vision - Yong Zhao
2:45 – 3:00 Break
3:00 - 5:15 EMAN Tutorial
5:45 Bus leaves for dinner
6:30 pm Workshop Banquet @ Grappino di Nino ~ 2817 W. Dallas ~ Houston, Tx 77019 Ph: 713-522-5120
9:00 pm Bus leaves for hotel
March 17, 2007 – Saturday
Day 4
8:00 Bus leaves hotel
8:00 - 9:00 Breakfast
Lecture
9:00 - 9:45 Homology Modeling (Modeler) - Ben Webb
9:45 - 10:30 Tomographic Single Particle Averaging - Mike Schmid
10:30 - 10:45 Coffee Break
10:45 - 11:45 EMEN2 Database Preview
11:45 – 12:45 Lunch
Hands-on
12:45 – 1:45 Modeller - Maya Topf
1:45 - 2:30 SPARX Intro - Pawel Penczek
2:30 - 2:45 Break
2:45 - 5:00 EMAN Tutorial
5:00 Workshop Ends
We can arrange taxis/car sharing if you let us know when you need to leave at registration
No bus service back to hotel again on saturday. Let us know if you need a ride !
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