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Single Particle Reconstructions and Visualization
EMAN Tutorial
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| Agenda |
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March 16, 2005 – Wednesday
Day 1
Registration 8:00 - 9:00
Lecture
9:00 – 10:30 Image Processing Basics and Image Contrast Theory - Wah Chiu
10:30 – 10:45 Break
10:45 – 11:30 Introduction to EMAN - Steve Ludtke
11:30 – 12:30 Lunch
(Those configuring laptops might try to return early)
Hands-on
12:30 – 1:00 Get accustomed to your computers, setup laptops
1:00 – 2:30 EMAN Tutorial 1 - Steve Ludtke
2:30 – 2:45 Break
2:45 – 5:00 EMAN Tutorial 1 continued
6:00 p.m. Dinner - Hilton
7:30 p.m. Participant Presentations
March 17, 2005 – Thursday
Day 2
Lecture
9:00 – 9:45 Data Collection Automation - Chris Booth, Mike Marsh and Juan Chang
9:45 – 10:15 3D Reconstruction Algorithms - Pawel Penczek
10:15 – 10:30 Break
10:30 – 11:15 3D Resolution Measures in Sing. Particle Analysis - Pawel Penczek
11:15 – 11:45 2D Alignment and Model Bias - Steve Ludtke
11:45 – 12:45 Lunch
Hands-on
12:45 – 2:30 EMAN Tutorial 2
2:30 – 2:45 Break
2:45 – 5:00 EMAN Tutorial 2
6:00 pm Dinner @ NCMI, BCM & NCMI Tour
March 18, 2005 – Friday
Day 3
Lecture
9:00 – 10:00 Chimera Introduction - Tom Ferrin
10:00 – 10:15 Break
10:15 – 11:00 Icosahedral Reconstruction - Wen Jiang
11:00 – 11:45 I've got a structure, what next? - Matt Baker
11:45 – 12:45 Lunch
Hands-on
12:45 – 2:30 EMAN Tutorial 3
2:30 – 2:45 Break
2:45 – 5:00 EMAN Tutorial 3
6: 30 pm Workshop Banquet @ Pappadeux
March 19, 2005 – Saturday
Day 4
Lecture
9:00 – 9:20 Cryo-Electorn Microscopy Deposition - Helen Berman
9:20 – 10:10 Michel Sanner
10:10 – 10:30 Break
10:30 – 11:15 Jianpeng Ma
11:15 – 12:00 Probing the Functional Dynamics of Supramolecular Assemblies by Hybrid Computational Strategies - Willy Wriggers
12:00 – 1:00 Lunch
Hands-on
1:00 – 2:00 Chimera Tutorial - Tom Goddard
2:00 – 2:45 Segment Volume Package - Shridar Lavu and Matt Baker
2:45 – 3:00 Break
3:00 – 5:00 EMANimator, Final Topics - Steve Ludtke
5:00 Workshop Ends
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